Job Description P42588 Confidence 100.00% Date Thu Jan 5 12:01:35 GMT 2012 Rank 14 Aligned Residues 386 % Identity 35% Template c2eo5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:419aa long hypothetical aminotransferase; PDBTitle: crystal structure of 4-aminobutyrate aminotransferase from sulfolobus2 tokodaii strain7 Resolution 1.90 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		L	N	R	E	V	I	E	Y	F	K	E	H	V	N	P	G	F	L	E	Y	R	K	S	V	T	A	G	G	D	Y	G	A	V	E	W	Q	A	G	S	L	N	T	L	V	D	T	Q	G	Q	E	F	I	D	C	L	G	G	F	G	I	F	N	V	G	H	.	R	N	P	V	V	V	S	A	V	Q	N	Q	L	A
Query Conservation																																																																			.
Alig confidence																					.	.	.	.	.	.	.	.																																							.
Template Conservation																					.	.	.	.	.	.	.	.
Template Sequence		L	S	R	K	I	I	E	E	S	D	I	Y	L	A	T	S	T	R	D	.	.	.	.	.	.	.	.	P	E	L	F	P	L	V	I	D	H	G	E	G	V	W	I	Y	D	V	D	G	N	K	Y	L	D	F	T	S	G	I	G	V	N	N	L	G	W	P	S	H	P	E	V	I	K	I	G	I	E	Q	M	Q
Template Known Secondary structure														S						S	.	.	.	.	.	.	.	.	S												B	T					T	T	S						S	S	G	G	G	G	T	T	T	T		B	S														T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20									.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		113	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure							.																						.
Query SS confidence							.																						.
Query Sequence		K	Q	P	L	H	.	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	.	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A
Query Conservation							.																						.
Alig confidence							.																						.																											.	.	.	.
Template Conservation																																																								.	.	.	.
Template Sequence		K	L	A	H	A	A	A	N	D	F	Y	N	I	P	Q	L	E	L	A	K	K	L	V	T	Y	S	P	G	N	F	Q	K	K	V	F	F	S	N	S	G	T	E	A	I	E	A	S	I	K	V	V	K	N	T	.	.	.	.	G	R	K	Y	I	I	A	F	L	G	G	F	H	G	R	T	F	G	S	I	S	L
Template Known Secondary structure		T	S				S		S		S																S	S		S	S								S	S														T	T	.	.	.	.	S								T	T					S	S
Template Predicted Secondary structure																																																								.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		191	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.																						.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure					.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	K	.	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L
Query Conservation					.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	S	K	A	V	Q	R	S	I	V	G	P	F	M	P	G	V	I	H	V	P	Y	P	N	P	Y	R	N	P	W	H	I	N	G	Y	E	N	P	S	E	L	V	N	R	V	I	E	F	I	E	D	Y	I	F	V	N	L	V	P	P	E	E	V	A	G	I	F	F	E	P	I	Q	G	E	G	G	Y	V	I
Template Known Secondary structure				S		G	G	G	G		S	S					T	T									S	S	S		T	T				T	T	T																T					T			G	G	G								S	S	B	T	T	T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	D	N	P	F	L
Query Conservation
Alig confidence																																																																								.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		P	P	K	N	F	F	A	E	L	Q	K	L	A	K	K	Y	G	I	L	L	V	D	D	E	V	Q	M	G	L	G	R	T	G	K	L	F	A	I	E	N	F	N	T	V	P	D	V	I	T	L	A	K	A	L	G	G	G	I	M	P	I	G	A	T	I	F	R	K	D	L	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S						G	G	G	G	T	T	T	S									G	G	G	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	N	E	I	G	Y	N	F	A	S	E	M
Query Conservation
Alig confidence																									.	.																					.	.	.	.	.	.	.
Template Conservation																									.	.																					.	.	.	.	.	.	.
Template Sequence		D	F	K	T	F	G	G	N	A	L	A	C	A	I	G	S	K	V	I	D	I	V	K	.	.	D	L	L	P	H	V	N	E	I	G	K	I	F	A	E	E	L	Q	G	L	.	.	.	.	.	.	.	A	D	D	V	R	G	I	G	L	A	W	G	L	E	Y	N	E	K	K	V	R	D	R	I	I	G	E	S
Template Known Secondary structure																									.	.																		T	T	S	.	.	.	.	.	.	.	S	S						T	T							S
Template Predicted Secondary structure																									.	.																					.	.	.	.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.			.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.								.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	Q	R	V	L	V	A	G	T	L	N	N	A	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L	A	A	M
Query Conservation
Alig confidence													.	.
Template Conservation													.	.
Template Sequence		F	K	R	G	L	L	L	L	P	A	G	.	.	R	S	A	I	R	V	I	P	P	L	V	I	S	E	E	E	A	K	Q	G	L	D	I	L	K	K	V	I	K	V	V
Template Known Secondary structure				T	T							T	.	.	T	T								T	T
Template Predicted Secondary structure													.	.
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.			.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.