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Job DescriptionP42588
Confidence99.82%DateThu Jan 5 12:01:35 GMT 2012
Rank192Aligned Residues312
% Identity18%Templatec2cb1A_
PDB info PDB header:lyaseChain: A: PDB Molecule:o-acetyl homoserine sulfhydrylase; PDBTitle: crystal structure of o-actetyl homoserine sulfhydrylase2 from thermus thermophilus hb8,oah2.
Resolution2.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130.........140.........150.........160.........170.......
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Query Sequence  HRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATS
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Template Sequence  YGFKTLEEGQERFATGEGYVYARQKDPTAKALEERLKALE. . GALEAVVLASGQAATFAALLAL. . . . LRPG. DEVVAAK
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SS

S
SBTTT

..T
SSSTT....

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T
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   30.........40.........50.........60......... 70.........80.........90. .... ....100..
 
   178.180.........190.........200.........210.........220.........230.........240.........250.......
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Query Sequence  GAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAV
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Template Sequence  GLFGQTIGLFGQVLSLMGVT. . . . . . . . . . VRYVDPEPEAVREALS. . . . . . AKTRAVFVETVANPALLVPD. . . . LEAL
Template Known Secondary structure  T

TTTTTT
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TTT




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   103......110.........120.. .......130........ .140.........150........ .160..
 
   258.260.........270.........280.........290.........300......... 310.........320.........330..
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Query Sequence  RKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPI. . GATIATEEVFSVLFDNPFLHTTT. . .
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Template Sequence  ATLAEEAGVALVVDNTFGAA. . . . . GALCRPLAWGAHVVVESLTWASGHGSVLGGAVLSRETELWRNYPQFLQPWEALRA
Template Known Secondary structure  T

GGGTT.....TTS

GGGGT
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S
SS






SGGGGSGGGG

GG
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   163......170.........180.. .......190.........200.........210.........220.........230.......
 
   333......340.........350.........360.........370...... ...380....
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Query Sequence  . . . . . . . . . . . . . . . . FGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLARE. . . . YPDLVQEA. . . . . . . .
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Template Sequence  RCFPERVRTLGLSLCGMALSPFNAYLLFQGLETV. . ALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKY
Template Known Secondary structure  GTTTT




GGG..T
TT
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TTSTT
TT
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   246...250.........260.........270......... 280.........290.........300.........310.........320...
 
   385....390.........400.........410.........420. ........430......
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Query Sequence  . RGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTLNN. . . . . . . . . . . . . . . . . . . . . . . . . . . AKTIRIEPPLTLTIE
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Template Sequence  LASGGPILTLDLGDLERASRFLGAI. . . RLLKAANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLD
Template Known Secondary structure 
SSS
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...SS
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TTTTTTTTS
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   324.....330.........340........ .350.........360.........370.........380.........390.........400
 
   437..440......
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Query Sequence  QCELVIKAAR
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Template Sequence  LLALFEEALE
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   401........410
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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