Job Description P42588 Confidence 100.00% Date Thu Jan 5 12:01:35 GMT 2012 Rank 20 Aligned Residues 393 % Identity 33% Template c1oatB_ PDB info PDB header:aminotransferase Chain: B: PDB Molecule:ornithine aminotransferase; PDBTitle: ornithine aminotransferase Resolution 2.50 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	R	E	V	I	E	Y	F	K	E	H	V	N	P	G	F	L	E	Y	R	K	S	V	T	A	G	G	D	Y	G	A	V	E	W	Q	A	G	S	L	N	T	L	V	D	T	Q	G	Q	E	F	I	D	C	L	G	G	F	G	I	F	N	V	G	H	R	N	P	V	V	V	S	A	V	Q	N	Q	L	A	K
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	D	D	I	F	E	R	E	Y	K	Y	G	A	H	N	Y	H	P	L	.	.	.	.	.	.	.	.	.	.	.	P	V	A	L	E	R	G	K	G	I	Y	L	W	D	V	E	G	R	K	Y	F	D	F	L	S	S	Y	S	A	V	N	Q	G	H	C	H	P	K	I	V	N	A	L	K	S	Q	V	D	K
Template Known Secondary structure		S												S								.	.	.	.	.	.	.	.	.	.	.	S								B	T					T	T							S	S					T		T	T		B	T													T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.												.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.
Query Sequence		Q	P	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	.	.	.	.	.	Q	S	P	R	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L
Query Conservation																																																					.	.	.	.	.
Alig confidence																										.	.																										.	.	.	.	.
Template Conservation																										.	.
Template Sequence		L	T	L	T	S	R	A	F	Y	N	N	V	L	G	E	Y	E	E	Y	I	T	K	L	F	.	.	N	Y	H	K	V	L	P	M	N	T	G	V	E	A	G	E	T	A	C	K	L	A	R	K	W	G	Y	T	V	K	G	I	Q	K	Y	K	A	K	I	V	F	A	A	G	N	F	W	G	R	T	L	S	A	I
Template Known Secondary structure			S				T	T	S			S	S													.	.	T		S						S	S																			T	T				T	T								T	T					S	S
Template Predicted Secondary structure																										.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M
Query Conservation
Alig confidence																																						.	.	.	.	.
Template Conservation																																						.	.	.	.	.
Template Sequence		S	S	S	T	D	P	T	S	Y	D	G	F	G	P	F	M	P	G	F	D	I	I	P	Y	N	D	L	P	A	L	E	R	A	L	Q	D	.	.	.	.	.	P	N	V	A	A	F	M	V	E	P	I	Q	G	E	A	G	V	V	V	P	D	P	G	Y	L	M	G	V	R	E	L	C	T	R	H	Q	V	L	F
Template Known Secondary structure		T	T								T	T	S		S			S	S						T	T									T	T	S	.	.	.	.	.	T	T								S	S	B	T	T	T	T		B				T	T													T
Template Predicted Secondary structure																																						.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.						.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N
Query Conservation
Alig confidence																																																								.	.
Template Conservation																																																								.	.
Template Sequence		I	A	D	E	I	Q	T	G	L	A	R	T	G	R	W	L	A	V	D	Y	E	N	V	R	P	D	I	V	L	L	G	K	A	L	S	G	G	L	Y	P	V	S	A	V	L	C	D	D	D	I	M	L	T	I	.	.	K	P	G	E	H	G	S	T	Y	G	G	N	P	L	G	C	R	V	A	I	A	A	L	E
Template Known Secondary structure						T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S						G	G	G	G	T	T	S	S													T	T	S	.	.		T	T	S	S			S	S	T	T
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.			.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	.	.	V	D	N	E	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V	A	G	T	L	N	N	A	K	T	I	R
Query Conservation																																																	.	.
Alig confidence																													.	.	.																		.	.																									.	.
Template Conservation																													.	.	.																																												.	.
Template Sequence		V	L	E	E	E	N	L	A	E	N	A	D	K	L	G	I	I	L	R	N	E	L	M	K	L	P	S	.	.	.	D	V	V	T	A	V	R	G	K	G	L	L	N	A	I	V	I	K	E	T	K	D	W	D	A	W	K	V	C	L	R	L	R	D	N	G	L	L	A	K	P	T	H	.	.	G	D	I	I	R
Template Known Secondary structure						T	T																	T	T	S		T	.	.	.	T	T								T	T									B	T	T	B												T	T					B	S	S	.	.	S	S
Template Predicted Secondary structure																													.	.	.																																												.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.				.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.			.	410	.	.	.
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	P	P	L	V	I	K	E	D	E	L	R	E	S	I	E	I	I	N	K	T	I	L	S
Template Known Secondary structure						T	T																			T
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.