Return to main results Retrieve Phyre Job Id

Job DescriptionP42588
Confidence35.74%DateThu Jan 5 12:01:35 GMT 2012
Rank331Aligned Residues70
% Identity16%Templatec1jgiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:amylosucrase; PDBTitle: crystal structure of the active site mutant glu328gln of2 amylosucrase from neisseria polysaccharea in complex with3 the natural substrate sucrose
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   213......220.........230.........240........ .250.........260.........270......
Predicted Secondary structure 















................








Query SS confidence 



































. . . . . . . . . . . . . . . .



























Query Sequence  GNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVIL. . . . . . . . . . . . . . . . PPPGYLTAVRKLCDEFGALMILDEVQTG
Query Conservation   
   
   
          







    
   ................     
  
  

   




 


 

Alig confidence 
















..
















................



























Template Conservation 


 

  




  

..
  
 
 

          

   

  


  

 



 

   
  

 



 
 

Template Sequence  GDLKGLKDKIPYFQELG. . LTYLYLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDFIFNH
Template Known Secondary structure  SSTT..
S


B


SS
STTTTS
S
SSSB
TTT

TT


S
Template Predicted Secondary structure 



..




































Template SS confidence 















































































   110.........120...... ...130.........140.........150.........160.........170.........180.......
 
   277..280....
Predicted Secondary structure 




Query SS confidence 







Query Sequence  MGRTGKMF
Query Conservation   

 
   
Alig confidence 







Template Conservation 

    
 
Template Sequence  TSNEHEWA
Template Known Secondary structure  TTS
Template Predicted Secondary structure 




Template SS confidence 







   188.190.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions