 |
Job Description | P77544 | Confidence | 28.58% | Date | Thu Jan 5 12:30:24 GMT 2012 |
Rank | 274 | Aligned Residues | 77 |
% Identity | 13% | Template | d2bfdb2 |
SCOP info | TK C-terminal domain-like
| TK C-terminal domain-like
| Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain
|
Resolution | 1.39 |
|
 |
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | T | L | W | S | D | A | H | F | F | S | P | Y | V | L | S | A | W | V | A | L | Q | E | K | . |
G | L | S | F | H | I | K | T | I | D | L | D | S | G | E | H | L | Q | P | T | W | Q | G | Y | G | Q | T | R | R | V | P | L | L | Q | I | D | D | F | E | L | S | E | S | S | A | I | A | E | Y | L | E | D | R |
Query Conservation |   |
  |   |   |
|
|   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |   |
|   |   |   | . |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |
|   | . |   |
|   |   |
|
|   |
|
|   |   |
|   |
|   |   |
|
|   |   |   |
|
|
|   |   |   |
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |
|
|   |
|
|   |
|   |   |   |
|   |
|   |
Template Sequence |   |
D | V | T | L | V | A | W | G | T | . |
Q | V | H | V | I | R | E | V | A | S | M | A | K | E | K | L | G | V | S | C | E | V | I | D | L | R | T | I | I | P | W | D | V | D | T | I | C | K | S | V | I | K | T | G | R | L | L | I | S | H | E | A | P | L | T | G | G | F | A | S | E | I | S | S | T | V | Q | E | E |
Template Known Secondary structure |   |
S |  |  |  |  |  |
| T | T | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
| S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  | S | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
221 | . | . | . | . | . | . | . | . | |
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|