Job Description P77544 Confidence 99.96% Date Thu Jan 5 12:30:24 GMT 2012 Rank 52 Aligned Residues 190 % Identity 23% Template c3lypA_ PDB info PDB header:transcription Chain: A: PDB Molecule:stringent starvation protein a; PDBTitle: structure of stringent starvation protein a homolog from pseudomonas2 fluorescens Resolution 1.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	T	L	W	S	D	A	H	F	F	S	P	Y	V	L	S	A	W	V	A	L	Q	E	K	G	L	S	F	H	I	K	T	I	D	L	D	S	G	E	H	L	Q	P	T	W	Q	G	Y	G	Q	T	R	R	V	P	L	L	Q	I	D	D	F	E	L	S	E	S	S	A	I	A	E	Y	L	E	D	R	F	A
Query Conservation
Alig confidence											.	.																									.	.	.	.	.	.																			.
Template Conservation											.	.																									.	.	.	.	.	.																			.
Template Sequence		R	L	A	C	Y	S	D	P	A	.	.	D	H	Y	S	H	R	V	R	I	V	L	A	E	K	G	V	S	A	E	I	I	S	V	E	.	.	.	.	.	.	Q	P	P	K	L	I	E	V	N	P	Y	G	S	L	P	T	L	V	.	D	R	L	A	L	W	E	S	T	V	V	X	E	Y	L	D	E	R	Y	P
Template Known Secondary structure									T	T	.	.															T										.	.	.	.	.	.										T	T			S	S				.							S												S
Template Predicted Secondary structure											.	.																									.	.	.	.	.	.																			.
Template SS confidence
		8	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	T	W	E	R	I	Y	P	L	D	L	E	N	R	A	R	A	R	Q	I	Q	A	W	L	R	S	D	L	M	P	I	R	E	E	R	P	T	D	V	V	F	A	G	A	K	K	A	P	L	T	A	E	G	K	A	S	A	E	K	L	F	A	M	A	E	H	L	L	V	L	G	Q	P	N	L	F	G	E	W
Query Conservation
Alig confidence					.	.	.																																.	.	.	.	.
Template Conservation					.	.	.																																.	.	.	.	.
Template Sequence		H	P	P	.	.	.	L	L	P	V	Y	P	V	A	R	A	N	S	R	L	L	I	H	R	I	Q	R	D	W	C	G	Q	V	D	L	I	L	.	.	.	.	.	D	P	R	T	K	E	A	A	R	V	Q	A	R	K	E	L	R	E	S	L	T	G	V	S	P	L	F	A	D	K	P	F	F	L	S	E	E	Q
Template Known Secondary structure		S	S		.	.	.		S		S	S																		T									.	.	.	.	.		T	T	S																				G	G	G	G	G	T	S	S	B	T	T	B	S	S
Template Predicted Secondary structure					.	.	.																																.	.	.	.	.
Template SS confidence
		83	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		C	I	A	D	T	D	L	A	L	M	I	N	R	L	V	L	H	G	D	E	V	P	.	.	.	E	R	L	V	D	Y	A	T	F	Q	W	Q	R	A	S	V	Q	R	F	I	A	L	S	A	K
Query Conservation																								.	.	.
Alig confidence																								.	.	.
Template Conservation
Template Sequence		S	L	V	D	C	C	L	L	P	I	L	W	R	L	P	V	L	G	I	E	L	P	R	Q	A	K	P	L	L	D	Y	X	E	R	Q	F	A	R	E	A	F	Q	A	S	L	S	G	V	E	R
Template Known Secondary structure														T	T	T	T	T	T					G	G	G													S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions