Job Description P77544 Confidence 99.97% Date Thu Jan 5 12:30:24 GMT 2012 Rank 45 Aligned Residues 189 % Identity 16% Template c2r4vA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:chloride intracellular channel protein 2; PDBTitle: structure of human clic2, crystal form a Resolution 1.85 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.							.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.
Query Sequence		K	P	A	I	T	L	W	S	D	A	H	F	F	.	.	.	.	.	.	S	P	Y	V	L	S	A	W	V	A	L	Q	E	K	G	L	S	F	H	I	K	T	I	D	L	D	S	G	E	H	L	Q	P	T	W	Q	G	Y	G	Q	T	R	R	V	P	L	L	Q	I	D	D	F	E	L	S	E	S	S	A	I	A
Query Conservation															.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	P	E	I	E	L	F	V	K	A	G	S	D	G	E	S	I	G	N	C	P	F	C	Q	R	L	F	M	I	L	W	L	K	G	V	K	F	N	V	T	T	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	P	G	T	N	P	P	F	L	V	Y	N	K	E	L	K	T	D	F	I	K	I	E
Template Known Secondary structure											B		T	T	S	S	S	B		S															T										.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	S						T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.														.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		E	Y	L	E	D	R	F	A	P	P	T	W	E	R	I	Y	P	L	D	L	E	N	R	A	.	.	.	.	R	A	R	Q	I	Q	A	W	L	R	S	D	L	M	P	I	R	E	E	R	P	T	D	V	V	F	A	G	A	K	K	A	P	L	T	A	E	G	K	A	S	A	E	K	L	F	A	M	A	E	H	L
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.
Template Conservation
Template Sequence		E	F	L	E	Q	T	L	A	P	P	R	Y	P	H	L	S	P	K	Y	K	E	S	F	D	V	G	C	N	L	F	A	K	F	S	A	Y	I	K	N	T	Q	K	E	A	N	K	N	F	E	K	S	L	L	K	E	F	K	R	L	D	D	Y	L	N	T	P	L	L	D	E	I	D	P	D	S	A	E	E	P	P
Template Known Secondary structure								S		T	T	T	S						S	S	T					T	T	T	T														G	G	G																					S			T	T				T	T	T	S	S			S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.									.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.
Query Sequence		L	V	L	G	Q	P	N	L	F	G	E	W	C	I	A	D	T	D	L	A	L	M	I	N	R	L	V	L	H	G	.	.	.	.	.	.	.	.	D	E	V	P	E	R	L	V	D	Y	A	T	F	Q	W	Q	R	A	S	V	Q	R
Query Conservation																																.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	R	R	L	F	L	D	G	D	Q	L	T	L	A	D	C	S	L	L	P	K	L	N	I	I	K	V	A	A	K	K	Y	R	D	F	D	I	P	A	E	F	S	G	V	W	R	Y	L	H	N	A	Y	A	R	E	E	F	T	H
Template Known Secondary structure		S				S	S	S	S	S	S	S																													T	T													T						T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions