 |
Job Description | P77544 | Confidence | 40.01% | Date | Thu Jan 5 12:30:24 GMT 2012 |
Rank | 258 | Aligned Residues | 67 |
% Identity | 9% | Template | c2pwjB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:mitochondrial peroxiredoxin; |
PDBTitle: structure of a mitochondrial type ii peroxiredoxin from2 pisum sativum
|
Resolution | 2.80 Å |
|
 |
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | T | L | W | S | D | A | H | F | F | S | P | Y | V | L | S | A | W | V | . |
. |
. |
. |
. |
. |
. |
. |
A | L | Q | E | K | G | L | S | F | H | I | K | T | I | D | L | D | S | G | E | H | L | Q | P | T | W | Q | G | Y | G | Q | T | R | R | V | P | L | L | Q | I | D | D | F | E | L | S | E | S |
Query Conservation |   |
  |   |   |
|
|   |   |   |   |   |   |
|
|   |   |   |
|
|   |   | . | . | . | . | . | . | . | . |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|   |
|   |   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   | . |   |
|   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|   |   |   |   |
|   |   |
|
Template Sequence |   |
K | V | V | I | F | G | L | P | G | A | Y | T | G | V | C | S | S | K | H | V | P | P | Y | K | H | N | I | D | K | F | K | A | K | G | V | D | . |
S | V | I | C | V | A | I | N | D | P | Y | T | V | N | A | W | A | E | K | I | Q | A | K | D | A | I | E | F | Y | G | D | F | D | G | S | F | H | K | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| S |
| T | T |
| T | T |  |  |  |  | T |  |  |  |  |  |  | T |  |  |  |  |  |  | T | T |
| S | . |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | T | S |  |  |  |  |
| T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|