Job Description P77544 Confidence 99.59% Date Thu Jan 5 12:30:24 GMT 2012 Rank 115 Aligned Residues 154 % Identity 11% Template c2hsmA_ PDB info PDB header:ligase/rna binding protein Chain: A: PDB Molecule:glutamyl-trna synthetase, cytoplasmic; PDBTitle: structural basis of yeast aminoacyl-trna synthetase complex2 formation revealed by crystal structures of two binary sub-3 complexes Resolution 3.00 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.							.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		Y	G	Q	T	R	R	V	P	L	L	Q	I	D	D	F	E	.	.	.	.	.	.	L	S	E	S	S	A	I	A	E	Y	L	E	D	R	F	A	P	P	T	W	E	R	I	Y	P	L	D	L	E	N	R	A	R	A	R	Q	I	Q	A	W	L	R	S	D	L	M	P	I	R	E	E	R	P	T	D	V	V	F
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																						.
Template Conservation																																													.
Template Sequence		L	T	I	N	G	K	A	P	I	V	A	Y	A	E	L	I	A	A	R	I	V	N	A	L	A	P	N	S	I	A	I	K	L	V	D	D	K	K	A	P	A	A	K	.	L	D	D	A	T	E	D	V	F	N	K	I	T	S	K	F	A	A	I	F	D	N	G	D	K	E	Q	V	A	K	W	V	N	L	A	Q
Template Known Secondary structure						T	T		S	S																S	T	T	S									S	S	S		S			.		T	T	B		T	T									T	T	T	T	S			S
Template Predicted Secondary structure																																													.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																						.														.	.	.	.
Query SS confidence																																						.														.	.	.	.
Query Sequence		A	G	A	K	K	A	P	L	T	A	E	G	K	A	S	A	E	K	L	F	A	M	A	E	H	L	L	V	L	G	Q	P	N	L	F	G	.	E	W	C	I	A	D	T	D	L	A	L	M	I	.	.	.	.	N	R	L	V	L	H	G	D	E	V	P	E	R	L	V	D	Y	A	T	F	Q	W	Q	R	A	S
Query Conservation																																						.														.	.	.	.
Alig confidence									.	.	.	.	.																									.														.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		K	E	L	V	I	K	N	.	.	.	.	.	F	A	K	L	S	Q	S	L	E	T	L	D	S	Q	L	N	L	R	T	F	I	L	G	G	L	K	Y	S	A	A	D	V	A	C	W	G	A	L	R	S	N	G	M	C	G	S	I	I	K	N	K	V	D	V	N	V	S	R	W	Y	T	L	L	E	M	D	P	I
Template Known Secondary structure			T	S	S				.	.	.	.	.															T	T	T		S	S	T	T			S	S																T	T					T	T	T	T	T	T													S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	R	F	I	A	L	S	A	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	E	A	H	D	F	L	S	K	S
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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