Return to main results Retrieve Phyre Job Id

Job DescriptionP06611
Confidence97.81%DateThu Jan 5 10:59:11 GMT 2012
Rank102Aligned Residues146
% Identity18%Templated1mo6a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.. .......50.........60.........70.........80.........90.........100.
Predicted Secondary structure 









.













































Query SS confidence 



















.


























































Query Sequence  VRAGEILHLVGPNGAGKSTL. LARMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFATPVWHYLTLHQHDK
Query Conservation 
  


 



 







.
  
 

    
 
                                

   
       
Alig confidence 



















.



















.......................................
Template Conservation     
 
  
 
 

 


 
 
         
  

 

 
.......................................
Template Sequence  LPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  B
SSS
SSSSSTT
SS.......................................
Template Predicted Secondary structure 














.......................................
Template SS confidence 















































































   57..60.........70.........80.........90.......
 
   102.......110.........120.........130.........140.........150........ .160.........170..
Predicted Secondary structure 






















.........






Query SS confidence 
























































. . . . . . . . .













Query Sequence  TRTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLD. . . . . . . . . EPMNSLDVAQQSAL
Query Conservation                           

 
       
  
   
  
   
 




.........


 


      
Alig confidence  ..







































.......







.........













Template Conservation  .. 
         
     
        
        
    .......   






  
            
     
Template Sequence  . . HALDPDYAKKLGVDTDSLLVSQPDTGEQALEIADMLIRSG. . . . . . . ALDIVVIDSVAALVPRAELEVGLQARLMSQA
Template Known Secondary structure  ..



T

GGG


SSTT.......

STT





Template Predicted Secondary structure  ..











.......












Template SS confidence 















































































   98.100.........110.........120.........130....... ..140.........150.........160........
 
   173......180.. .......190. ........200.........210......
Predicted Secondary structure  .


...






Query SS confidence 









.








. . .
























Query Sequence  DKILSALCQQ. GLAIVMSSH. . . DLNHTLRHAHRAWLLKGGKMLASGR
Query Conservation     
  
   .
 


  

...         


 

  
 

  
 
Alig confidence 









.








...
























Template Conservation     
  

      

 
 
       
   
     
          
Template Sequence  LRKMTGALNNSGTTAIFINQLTTGGKALKFYASVRMDVRRVETLKDGT
Template Known Secondary structure  T



TT
S

B
SS
Template Predicted Secondary structure 

























Template SS confidence 















































   176...180.........190.........200.........210.........220...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions