Job Description P06611 Confidence 94.38% Date Thu Jan 5 10:59:11 GMT 2012 Rank 491 Aligned Residues 173 % Identity 13% Template c3bs4A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein ph0321; PDBTitle: crystal structure of uncharacterized protein ph0321 from pyrococcus2 horikoshii in complex with an unknown peptide Resolution 1.60 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		V	R	A	G	E	I	L	H	L	V	G	P	N	G	A	G	K	S	T	L	L	A	R	M	A	.	.	G	M	T	S	G	K	G	S	I	Q	F	A	G	Q	P	L	E	A	W	S	A	T	K	L	A	L	H	R	A	Y	L	S	Q	Q	Q	T	P	P	F	A	T	P	V	W	H	Y	L	T	L	H	Q	H	D
Query Conservation																											.	.
Alig confidence																											.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	H	S	L	I	L	I	H	E	E	D	A	S	S	R	G	K	D	I	L	F	Y	I	L	S	R	K	L	K	S	D	N	L	V	G	M	F	S	I	S	Y	P	L	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	I	I	R	I	L	S	R	F	G	V	D	V	I	K	Y	L	E	N	H	R	L	A
Template Known Secondary structure			T	T									S	G	G	G																T	T									S	S					.	.	.	.	.	.	.	.	.	.	.	.								T	T									T	T	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.													.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	R	T	E	L	L	N	D	V	A	G	A	L	A	L	D	D	K	L	G	R	S	T	N	Q	L	S	G	G	E	W	Q	R	V	R	L	A	A	V	V	L	Q	I	T	P	Q	A	N	P	A	G	Q	L	L	L	L	D	E	P	M	N	S	L	D	V	A	Q	Q	S	A	L	D	K	I	L	S	A	L	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	D	T	F	G	S	F	H	G	I	M	P	G	V	W	Y	L	E	G	M	L	S	S	E	T	L	P	I	K	Y	A	K	A	V	E	D	H	K	K	V	W	M	D	L	N	L	F	E	G	R	E	L	Y	G	F	A	I	S	M	S	G	Y	L	E	V	F	T	P	E	E	T	L	R	Y	L	E	T	S	A
Template Known Secondary structure											T			T	T						S				T	T	T																			T	T		S	T	T									T	G	G	G	G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		181	.												.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Query Sequence		Q	Q	.	.	.	.	.	.	.	.	.	.	.	G	L	A	I	V	M	S	S	H	D	L	N	H	.	.	.	.	.	.	T	L	R	H	A	H	R	A	W	L	L	K
Query Conservation				.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation
Template Sequence		E	V	R	Y	G	H	P	A	Y	K	K	Y	P	R	G	T	N	F	W	L	W	E	G	V	K	D	K	R	V	L	L	S	V	Y	R	R	A	D	Y	V	L	K	T	R
Template Known Secondary structure												S	S											S		S													S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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