Job Description P06611 Confidence 100.00% Date Thu Jan 5 10:59:11 GMT 2012 Rank 42 Aligned Residues 213 % Identity 21% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		M	S	I	V	M	Q	L	Q	D	V	A	E	S	T	.	.	R	L	G	P	L	S	G	E	V	R	A	G	E	I	L	H	L	V	G	P	N	G	A	G	K	S	T	L	L	A	R	M	A	G	M	T	S	G	K	G	S	I	Q	F	A	G	Q	P	L	E	A	W	S	A	T	K	L	A	L	H	R	A	Y	L
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		F	G	V	N	I	E	F	S	D	V	N	F	S	Y	H	R	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	E	G	D	I	K	I	G	G	K	N	V	N	K	Y	N	R	N	S	I	R	S	I	I	G	I	V
Template Known Secondary structure		T																S										T	T								S	T	T	S	S									T	T	S	S									T	T			G	G	G	S							T	T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																														.	.	.	.	.
Query SS confidence																																														.	.	.	.	.
Query Sequence		S	Q	Q	Q	T	P	P	F	A	T	P	V	W	H	Y	L	T	L	H	Q	H	D	K	T	R	T	E	L	L	N	D	V	A	G	A	L	A	L	D	D	K	L	G	R	.	.	.	.	.	S	T	N	Q	L	S	G	G	E	W	Q	R	V	R	L	A	A	V	V	L	Q	I	T	P	Q	A	N	P	A	G	Q
Query Conservation																																														.	.	.	.	.
Alig confidence						.																	.																							.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation						.																	.																																																	.	.	.	.	.	.	.
Template Sequence		P	Q	D	T	.	I	L	F	N	E	T	I	K	Y	N	I	L	Y	G	K	L	.	D	A	T	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S	G	G	E	R	Q	R	I	A	I	A	R	C	L	L	K	.	.	.	.	.	.	.	D	P	K
Template Known Secondary structure			S	S		.				S	S	B							T	T	S	T	.	T													T	T								S	T	T	G	G	G		B																		T	.	.	.	.	.	.	.			S
Template Predicted Secondary structure						.																	.																																																	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.								.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		L	L	L	L	D	E	P	M	N	S	L	D	V	A	Q	Q	S	A	L	D	K	I	L	S	A	L	C	Q	Q	G	L	A	I	V	M	S	S	H	D	L	N	H	T	L	R	H	A	H	R	A	W	L	L	K	G	G	K	M	L	A	S	G	R	R	E	E	V	L	.	T	P	P	N	L	A	Q	A	Y	G	M
Query Conservation																																																																						.
Alig confidence														.	.	.	.	.	.	.	.	.	.																						.																									.
Template Conservation														.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		I	V	I	F	D	D	S	K	T	E	Y	L	.	.	.	.	.	.	.	.	.	.	F	Q	K	A	V	E	D	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K	G	T	H	K	D	L	L	K	L	N	G	E	Y	A	E	M	W	N	M
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.																S	S	G	G	G	S	.	T	T		S							T	T															T	S								T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.											.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		233
Predicted Secondary structure
Query SS confidence
Query Sequence		N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		254

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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