Job Description P06611 Confidence 100.00% Date Thu Jan 5 10:59:11 GMT 2012 Rank 41 Aligned Residues 219 % Identity 23% Template c2d3wB_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:probable atp-dependent transporter sufc; PDBTitle: crystal structure of escherichia coli sufc, an atpase2 compenent of the suf iron-sulfur cluster assembly machinery Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.					.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.
Predicted Secondary structure													.	.	.	.																																			.	.	.																											.
Query SS confidence													.	.	.	.																																			.	.	.																											.
Query Sequence		V	M	Q	L	Q	D	V	A	E	S	T	.	.	.	.	R	L	G	P	L	S	G	E	V	R	A	G	E	I	L	H	L	V	G	P	N	G	A	G	K	S	T	L	L	A	R	M	A	G	.	.	.	M	T	S	G	K	G	S	I	Q	F	A	G	Q	P	L	E	A	W	S	A	T	K	L	A	L	H	.	R
Query Conservation													.	.	.	.																																			.	.	.																											.
Alig confidence													.	.	.	.																																			.	.	.																											.
Template Conservation
Template Sequence		M	L	S	I	K	D	L	H	V	S	V	E	D	K	A	I	L	R	G	L	S	L	D	V	H	P	G	E	V	H	A	I	M	G	P	N	G	S	G	K	S	T	L	S	A	T	L	A	G	R	E	D	Y	E	V	T	G	G	T	V	E	F	K	G	K	D	L	L	A	L	S	P	E	D	R	A	G	E	G	I
Template Known Secondary structure												S	S	S													T	T									T	T	S											T		T	T											T	T			G	G	G	S									T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.													100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		A	Y	L	S	Q	Q	Q	T	P	P	F	A	T	P	V	W	H	Y	L	T	L	H	Q	H	.	.	.	.	.	.	.	.	.	.	.	.	D	K	T	R	T	E	L	L	N	D	V	A	G	A	L	A	L	D	D	.	.	K	L	G	R	S	T	N	Q	L	S	G	G	E	W	Q	R	V	R	L	A	A	V	V
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		F	M	A	F	Q	Y	P	V	E	I	P	G	V	S	N	Q	F	F	L	Q	T	A	L	N	A	V	R	S	Y	R	G	Q	E	T	L	D	R	F	D	F	Q	D	L	M	E	E	K	I	A	L	L	K	M	P	E	D	L	L	T	R	S	V	N	V	G	F	S	G	G	E	K	K	R	N	D	I	L	Q	M	A
Template Known Secondary structure												T	T																		T	T																				T	T			T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	I	T	P	Q	A	N	P	A	G	Q	L	L	L	L	D	E	P	M	N	S	L	D	V	A	Q	Q	S	A	L	D	K	I	L	S	A	L	C	Q	Q	G	L	A	I	V	M	S	S	H	D	L	N	H	T	L	R	H	A	H	R	A	W	L	L	K	G	G	K	M	L	A	S	G	R	R	E	E	V	L
Query Conservation
Alig confidence				.	.	.	.	.	.	.												.
Template Conservation				.	.	.	.	.	.	.												.
Template Sequence		V	L	.	.	.	.	.	.	.	E	P	E	L	C	I	L	D	E	S	D	.	S	L	D	I	D	A	L	K	V	V	A	D	G	V	N	S	L	R	D	G	K	R	S	F	I	I	V	T	H	Y	R	I	L	D	Y	I	K	P	D	Y	V	H	V	L	Y	Q	G	R	I	V	K	S	G	D	F	T	L	V	K
Template Known Secondary structure				.	.	.	.	.	.	.			S									.																				S	S	S																	S							T	T							S	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.												.
Template SS confidence
		161	.								.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		222	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	P	N	L	A	Q	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	E	E	Q	G	Y	G	W
Template Known Secondary structure						T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions