Job Description P06611 Confidence 97.44% Date Thu Jan 5 10:59:11 GMT 2012 Rank 122 Aligned Residues 129 % Identity 15% Template c2cvhB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dna repair and recombination protein radb; PDBTitle: crystal structure of the radb recombinase Resolution 2.20 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	A	G	E	I	L	H	L	V	G	P	N	G	A	G	K	S	T	L	L	A	R	M	A	G	M	T	S	G	K	G	S	I	Q	F	A	G	Q	P	L	E	A	W	S	A	T	K	L	A	L	H	R	A	Y	L	S	Q	Q	Q	T	P	P	F	A	T	P	V	W	H	Y	L	T	L	H	Q	H	D	K	T
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	P	G	V	L	T	Q	V	Y	G	P	Y	A	S	G	K	T	T	L	A	L	Q	T	G	L	L	S	G	K	K	V	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	T	E	G	G	F	S	P
Template Known Secondary structure		B		T	T	S							S	T	T	S	S														S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																																						.	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.									.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.
Query Sequence		R	T	E	L	L	N	D	V	A	G	A	L	A	L	D	D	K	L	G	R	S	T	N	Q	L	S	G	G	E	W	Q	R	V	R	L	A	A	V	V	L	Q	I	T	P	Q	A	N	P	A	G	Q	L	L	L	L	D	E	P	M	N	S	L	.	.	.	.	.	.	.	.	D	V	A	Q	Q	S	A	L	D	K
Query Conservation																																																																.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.																.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.
Template Sequence		E	R	L	V	Q	M	A	E	T	R	G	L	N	P	E	E	A	L	S	R	F	I	L	F	T	P	S	D	F	K	E	Q	R	R	V	I	G	S	L	K	K	T	V	D	.	.	.	S	N	F	A	L	V	V	V	D	S	I	T	A	H	Y	R	A	E	E	N	R	S	G	L	I	A	E	L	S	R	Q	L	Q
Template Known Secondary structure											T	T																	S	S																.	.	.	T	T										S		S	B	T	T	B
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		175	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		I	L	S	A	L	C	Q	Q	.	G	L	A	I	V	M	S	S	H
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		V	L	L	W	I	A	R	K	H	N	I	P	V	I	V	I	N	Q
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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