Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8P6
Confidence99.97%DateThu Jan 5 11:08:26 GMT 2012
Rank4Aligned Residues268
% Identity18%Templated1p7da_
SCOP infoDNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Lambda integrase-like, catalytic core
Resolution2.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MTDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIINFASENGLQSWQQCDVTMVRNFAVRSRRKGLGAASLALRLSAL
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Template Sequence  MT. LHSWLDRYEKILAS. RGIKQKTLINYMSKIKAIRRGLP. . . . . . DAPLTTKEIAAMLNGYIDEG. KAASAKLIRSTL
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   74. ....80......... 90.........100.........110.. .......120.........130.. .......140....
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  RSFFDWLVSQNELKANPAKGVSAPKAPRHLPKNIDVDDMNRLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHL
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Template Sequence  SDAFREAIAEGHITTNHVAATRAAKSEVRRSRLTADEYLKIYQAAESS. . . PCWLRLAMELAVVTGQRVGDLCEMKWSDI
Template Known Secondary structure  TTS
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GGGS...



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   148.150.........160.........170.........180.........190..... ....200.........210.........220....
 
   161........170.........180.........190.. .......200.........210.........220.........230......
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Query Sequence  DLESGEVWVMGKGSKERRLPIGRNAVAWIEHW. . . . LDLRDLFGSEDDALFLSKLGKRISARNVQKRFAEWGIKQGLNNH
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Template Sequence  VDGYLYVEQSKTGVKIAIPTALHIDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDP
Template Known Secondary structure 
SS
TTT

TT
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SSBSSB
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   225....230.........240.........250.........260.........270.........280.........290.........300....
 
   237..240.........250.........260.........270.........280.
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Query Sequence  VHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQ
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Template Sequence  PTFHELRSLSAR. LYEKQISDKFAQHLLGHKSDTMASQRDDRGRE
Template Known Secondary structure 

TT.T


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   305....310...... ...320.........330.........340........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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