Job Description P0A8P6 Confidence 98.89% Date Thu Jan 5 11:08:26 GMT 2012
Rank 21 Aligned Residues 100
% Identity 8% Template c3lysC_
PDB info
PDB header: recombinationChain: C: PDB Molecule: prophage pi2 protein 01, integrase;
PDBTitle: crystal structure of the n-terminal domain of the prophage2 pi2 protein 01 (integrase) from lactococcus lactis,3 northeast structural genomics consortium target kr124f
Resolution 2.80 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
M T D L H T D V E R Y L R Y L S V E R Q L S P I T L L N Y Q R Q L E A I I N F A S E N G L Q S W Q Q C D V T M V R N F A V R S R R K G L G A A S L A L R L S A L
Query Conservation  
                                                                                                                                 
Alig confidence  
. . . . . .
Template Conservation  
    .                     .                                         . . .                         .                          
Template Sequence  
Q E .
I S E Y F K D W X E L Y K K N .
A I D E X T Y K G Y E Q T L K Y L K T Y X P N V .
.
.
L I S E I T A S S Y Q R A L N K F .
A E T H A K A S T K G F H T R V
Template Known Secondary structure  
S B . T T T . T S S S S . . . B T T T . T T S
Template Predicted Secondary structure  
. . . . . .
Template SS confidence  
   
58 .
60 . . . . . . . . . 70 . . . .
. . . . . 80 . . . . . . . . . 90 . . . . . . . .
. 100 . . . . . . . . . 110 . . . . .
. . . . 120 . . . . . . . . . 130 .
 
   
81 . . . . . . . . 90 . . . . . . . . . 100 . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
R S F F D W L V S Q N E L K A N P A K G V S A P K A
Query Conservation  
                                                   
Alig confidence  
Template Conservation  
                             
Template Sequence  
R A S I Q C L I E E G R L Q K D F T T R A V V K G L
Template Known Secondary structure  
T S S S S S S T T
Template Predicted Secondary structure  
Template SS confidence  
   
132 . . . . . . . 140 . . . . . . . . . 150 . . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]