Job Description P0A8P6 Confidence 99.16% Date Thu Jan 5 11:08:26 GMT 2012 Rank 14 Aligned Residues 93 % Identity 25% Template c2oxoA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: crystallization and structure determination of the core-2 binding domain of bacteriophage lambda integrase Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	D	L	H	T	D	V	E	R	Y	L	R	Y	L	S	V	E	R	Q	L	S	P	I	T	L	L	N	Y	Q	R	Q	L	E	A	I	I	N	F	A	S	E	N	G	L	Q	S	W	Q	Q	C	D	V	T	M	V	R	N	F	A	V	R	S	R	R	K	G	L	G	A	A	S	L	A	L	R	L	S	A	L
Query Conservation
Alig confidence				.																.																									.	.	.																						.
Template Conservation				.																.																									.	.	.																						.
Template Sequence		M	T	.	L	H	S	W	L	D	R	Y	E	K	I	L	A	S	R	.	G	I	K	Q	K	T	L	I	N	Y	M	S	K	I	K	A	I	R	R	G	L	P	D	A	.	.	.	P	L	E	D	I	T	T	K	E	I	A	A	M	L	N	G	Y	I	D	E	G	.	K	A	A	S	A	K	L	I	R	S	T	L
Template Known Secondary structure			B	.																.																					S		S		.	.	.	B	G	G	G																T	T	.
Template Predicted Secondary structure				.																.																									.	.	.																						.
Template SS confidence
		74	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	F	F	D	W	L	V	S	Q	N	E	L	K	A	N	P	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	A	F	R	E	A	I	A	E	G	H	I	T	T	N	H	V	A
Template Known Secondary structure											T	T	S		S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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