Job Description P0A8P6 Confidence 98.59% Date Thu Jan 5 11:08:26 GMT 2012 Rank 26 Aligned Residues 109 % Identity 12% Template c2kkvA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: solution nmr structure of an integrase domain from protein2 spa4288 from salmonella enterica, northeast structural3 genomics consortium target slr105h Resolution UNK

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	L	H	T	D	V	E	R	Y	L	R	Y	L	S	V	E	R	Q	L	S	P	I	T	L	L	N	Y	Q	R	Q	L	E	A	I	I	N	F	A	S	E	N	G	L	Q	S	W	Q	Q	C	D	V	T	M	V	R	N	F	A	V	R	S	R	R	K	G	L	G	A	A	S	L	A	L	R	L	S	A	L	R
Query Conservation
Alig confidence														.	.	.																						.	.																													.
Template Conservation														.	.	.																						.	.																													.
Template Sequence		Y	T	F	E	T	I	A	R	E	W	H	E	.	.	.	S	N	K	R	W	S	E	D	H	R	S	R	V	L	R	Y	L	E	L	Y	I	.	.	F	P	H	I	G	S	S	D	I	R	Q	L	K	T	S	H	L	L	A	P	I	K	E	V	D	T	S	G	.	K	H	D	V	A	Q	R	L	Q	Q	R	V	T
Template Known Secondary structure			S										T	.	.	.	T			S	S																	.	.	S	S	S	S	T	T	S		T	T				S	G	G	G										T	T	.	T
Template Predicted Secondary structure														.	.	.																						.	.																													.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	F	D	W	L	V	S	Q	N	E	L	K	A	N	P	A	K	G	V	S	A	P	K	A	P	R	H	L	P	K	N	I	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	M	R	Y	A	V	Q	N	D	Y	I	D	S	N	P	A	S	D	M	A	G	A	L	S	T	T	K	A	R	H	Y	P	L	E
Template Known Secondary structure										T	T	S	S		S		S		S	S	S	S				S						S	S			T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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