Job Description P37772 Confidence 2.26% Date Thu Jan 5 11:57:38 GMT 2012 Rank 47 Aligned Residues 206 % Identity 14% Template c3qe7A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:uracil permease; PDBTitle: crystal structure of uracil transporter--uraa Resolution 2.78 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	V	L	V	M	G	C	A	F	G	A	F	M	G	L	L	I	D	A	L	K	I	P	A	F	I	I	T	L	A	G	M	F	F	L	R	G	V	S	Y	L	V	S	E	E	S	I	P	I	N	H	P	I	Y	D	T	L	S	S	L	A	W	K	I	P	G	G	G	R	L	S	A	M	G	L	L	M	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	T	I	I	I	S	I	T	T	L	A	V	T	V	L	G	S	V	L	F	R	G	F	L	A	I	I	P	I	L	I	G	V	L	V	G	Y	A	L	S	F	A	M	G	I	V	D	T	T	P	I	I	N	A	H	W	F	A	L	P	T	L	Y	T	P	R	F	E	W	F	A	I	L	T	I	L	P	A	A
Template Known Secondary structure																					S	S	S	T	T	T	T	T																				T	T	S	S					S		S	S																			T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	V	I	G	I	F	L	A	H	R	T	R	F	G	N	Q	V	Y	A	I	G	G	N	A	T	S	A	N	L	M	G	I	S	T	R	S	T	T	I	R	I	Y	M	L	S	T	G	L	A	T	L	A	G	I	V	F	S	I	Y	T	Q	A	G	Y	A	L	A	G	V	G	V	E	L	D	A	I	A	S	V
Query Conservation
Alig confidence																											.	.	.	.	.	.	.						.																			.	.																.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.						.																			.	.																.	.	.	.	.	.	.
Template Sequence		L	V	V	I	A	E	H	V	G	H	L	V	V	T	A	N	I	V	K	K	D	L	L	R	D	.	.	.	.	.	.	.	P	G	L	H	R	.	S	M	F	A	N	G	L	S	T	V	I	S	G	F	F	G	S	T	.	.	P	N	T	T	Y	G	E	N	I	G	V	M	A	I	T	.	.	.	.	.	.	.
Template Known Secondary structure																				T	S		T				.	.	.	.	.	.	.						.																T			.	.																.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.						.																			.	.																.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260								.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		V	I	G	G	T	L	L	S	G	G	V	G	T	V	L	G	T	L	F	G	V	A	I	Q	G	L	I	Q	T	.	.	.	Y	I	N	F	D	G	T	L	S	S	W	W	T	K	I	A	I	G	I	L	L	F	I	F	I	A	L	Q	R	G	L	T	V	L	W	E	N	R	Q	S	S	P	V	T	R
Query Conservation																															.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																					.	.	.											.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																		.	.
Template Sequence		.	.	.	.	.	.	.	.	.	R	V	Y	S	T	W	V	I	G	G	A	A	I	F	A	I	L	L	S	C	V	G	K	L	A	A	A	I	Q	M	I	P	L	.	.	P	V	M	G	G	V	S	L	L	L	Y	G	V	I	G	A	S	G	I	R	V	L	I	E	S	K	V	D	Y	N	K	A	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	T	B																	T										T	T	S			.	.																									T	T	S		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																		.	.
Template SS confidence
											299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions