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Job DescriptionP37772
Confidence2.26%DateThu Jan 5 11:57:38 GMT 2012
Rank47Aligned Residues206
% Identity14%Templatec3qe7A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:uracil permease; PDBTitle: crystal structure of uracil transporter--uraa
Resolution2.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.........110.........120.........130.........140.........150.........160.........170.
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Query Sequence  PLVLVMGCAFGAFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGGRLSAMGLLMLA
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Template Sequence  SKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTPRFEWFAILTILPAA
Template Known Secondary structure  SSSTTTTTTTSSS
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   156...160.........170.........180.........190.........200.........210.........220.........230.....
 
   172.......180.........190.........200.........210.........220.........230.........240.........250.
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Query Sequence  VVVIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAGVGVELDAIASV
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Template Sequence  LVVIAEHVGHLVVTANIVKKDLLRD. . . . . . . PGLHR. SMFANGLSTVISGFFGST. . PNTTYGENIGVMAIT. . . . . . .
Template Known Secondary structure  TS
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   236...240.........250.........260 ..... ....270.........280... ......290........
 
   252.......260.........270.........280 .........290.........300.........310.........320.....
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Query Sequence  VIGGTLLSGGVGTVLGTLFGVAIQGLIQT. . . YINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQSSPVTR
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Template Sequence  . . . . . . . . . RVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPL. . PVMGGVSLLLYGVIGASGIRVLIESKVDYNKAQ
Template Known Secondary structure  .........TB

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   299300.........310.........320.........330. ........340.........350.........360....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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