Return to main results Retrieve Phyre Job Id

Job DescriptionP37772
Confidence98.38%DateThu Jan 5 11:57:38 GMT 2012
Rank1Aligned Residues148
% Identity11%Templatec2nq2A_
PDB info PDB header:metal transportChain: A: PDB Molecule:hypothetical abc transporter permease protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter.
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.........100.........110.........120.........130.........140.........150.
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  TGVFLAKVIGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINHPIYDTLSS
Query Conservation 

                      
     
 
   
         
 

    
                         
Alig confidence 















































































Template Conservation 

 
                            
           


 



     

   
            
  

Template Sequence  GSAFGGTLAIFFGFSLYGLFTSTILFGFGTLALVFLFSFKSLLMLILIGMILSGLFSALVSLLQYISDTEEKLPSIVFWL
Template Known Secondary structure  TT

T

SS
TTTT
Template Predicted Secondary structure 





Template SS confidence 















































































   102.......110.........120.........130.........140.........150.........160.........170.........180.
 
   152.......160.........170.........180.........190.........200.........210.........220....
Predicted Secondary structure 

















Query SS confidence 








































































Query Sequence  LAWKIPGGGRLSAMGLLMLAVVVIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLA
Query Conservation                              
 

  
  



  
   
   

   
    
  


 




Alig confidence 






























.....




































Template Conservation   


          
     
 
        ..... 
 

 

   
 





       
 
  

 
 
Template Sequence  MGSFATSNWEKLLFFFVPFLLCSSILLSLSW. . . . . RLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQ
Template Known Secondary structure  T

STT

TTT.....GGGGGGS
TT

Template Predicted Secondary structure 







.....









Template SS confidence 








































































   186...190.........200.........210...... ...220.........230.........240.........250...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions