Job Description P37772 Confidence 3.39% Date Thu Jan 5 11:57:38 GMT 2012 Rank 22 Aligned Residues 192 % Identity 10% Template c2b2hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter; PDBTitle: ammonium transporter amt-1 from a. fulgidus (as) Resolution 1.54 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		I	K	R	N	L	P	L	M	I	T	I	G	V	F	V	L	G	Y	L	Y	C	L	T	Q	F	P	G	F	A	S	T	R	V	I	C	N	I	L	T	D	N	A	F	L	G	I	I	A	V	G	M	T	F	V	I	.	.	.	L	S	G	G	I	D	L	S	V	G	S	V	I	A	F	T	G	V	F	L	A	K
Query Conservation																																																									.	.	.
Alig confidence																																																									.	.	.
Template Conservation
Template Sequence		I	E	P	H	S	I	P	L	T	L	I	G	A	A	L	L	W	F	G	W	F	G	F	N	G	G	S	A	L	A	A	N	D	V	A	I	N	A	V	V	V	T	N	T	S	A	A	V	A	G	F	V	W	M	V	I	G	W	I	K	G	K	P	G	S	L	G	I	V	S	G	A	I	A	G	L	A	A	I	T
Template Known Secondary structure					S																						G	G	G	S	S	S	S																													S																			T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		V	I	G	D	F	G	L	S	P	L	L	A	F	P	L	V	L	V	M	G	C	A	F	G	A	F	M	G	L	L	I	D	A	L	K	I	P	A	F	.	.	I	I	T	L	A	G	M	F	F	L	R	G	V	S	Y	L	V	S	E	E	S	I	P	I	N	H	P	I	Y	D	T	L	S	S	L	A	W	K	I
Query Conservation																																									.	.
Alig confidence							.																																		.	.																																			.
Template Conservation							.																																																																						.
Template Sequence		P	A	A	G	F	.	V	D	V	K	G	A	I	V	I	G	L	V	A	G	I	V	C	Y	L	A	M	D	F	R	I	K	K	K	I	D	E	S	L	D	A	W	A	I	H	G	I	G	G	L	W	G	S	V	A	V	G	I	L	A	N	P	E	V	N	G	Y	A	G	L	L	F	G	N	P	.	Q	L	L	V
Template Known Secondary structure		T	T	T	T	T	.																											T	T				T	T																											S				G	G	G	T			.
Template Predicted Secondary structure							.																																																																						.
Template SS confidence
		262	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	G	G	R	L	S	A	M	G	L	L	M	L	A	V	V	V	I	G	I	F	L	A	H	R	T	R	F	G	N	Q	V	Y	A	I	G	G	N	A	T	S
Query Conservation
Alig confidence																														.	.	.
Template Conservation																														.	.	.
Template Sequence		S	Q	L	I	A	V	A	S	T	T	A	Y	A	F	L	V	T	L	I	L	A	K	A	V	D	A	A	V	.	.	.	G	L	R	V	S	S	Q	E	E	Y	V
Template Known Secondary structure																													T	.	.	.		S	B
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.				.	.	370	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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