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Job DescriptionP02920
Confidence46.44%DateThu Jan 5 10:57:36 GMT 2012
Rank6Aligned Residues323
% Identity11%Templatec3b9yA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWII
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Template Sequence  MVFVRRYGFSATTGTYLVVATGLPLYILLRANGIFGHALTPHSVDAVIYAEFAVATGL. . IAMGAVLGRLRVFQYALLAL
Template Known Secondary structure  GGGSTT
TTTTSS


SSS..TTSS
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   5960.........70.........80.........90.........100.........110...... ...120.........130......
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  TGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALCASIVGI
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Template Sequence  FIVPVYLLNEWLVLDNASG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LTEG
Template Known Secondary structure  TT
TTS.........................................................S
TT
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   137..140.........150..... ....
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  MFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFD
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Template Sequence  FQDSAGSIAIHAFGAYFGLGVSIALTTAAQRAQPIESDATSD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . RFSMLGSMV
Template Known Secondary structure 


TT
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   160.........170.........180.........190.........200. ........210
 
   241........250.........260.........270.........280..... ....290.........300.........310.........
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Query Sequence  QQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINR. IGGKNALLLAGTIMSVRIIGSSFATSALEVVILK
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Template Sequence  LWLFWPSFATAIVPFEQMPQTIVNTLLALCGATLATYFLSALFHKGKASIVDMANAALAGGVAIGSVCNIVGPVGAFVIG
Template Known Secondary structure  TTS
GGGTTT


TTTTTTTTS
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   211........220.........230.........240.........250.........260.........270.........280.........290
 
   320.........330.........340.........350.........360.........370.........380. ........390........
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Query Sequence  TLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGA. YLVLGLVALGFTLISVF
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Template Sequence  LLGGAISVVGFVFIQPMLESKAKTIDTCGVHNL. HGLPGLLGGFSAILIVP. . . GIAVAQLTGIGITLALALIGGVIAGA
Template Known Secondary structure  TS



TT
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   291........300.........310.........320... ......330.........340 .........350.........360......
 
   399400.........410.....
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Query Sequence  TLSGPGPLSLLRRQVNE
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Template Sequence  LIKLTGTTKQAYEDSHE
Template Known Secondary structure  TT


SSTT
GGGT
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   367..370.........380...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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