 |
Job Description | P0AGK8 | Confidence | 33.30% | Date | Thu Jan 5 11:29:24 GMT 2012 |
Rank | 419 | Aligned Residues | 42 |
% Identity | 17% | Template | d2fq3a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| SWIRM domain
|
Resolution | 1.40 |
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | L | D | V | A | L | N | S | E | A | G | P | V | P | L | A | D | I | S | E | R | Q | G | I | S | L | S | Y | L | E | Q | L | F | S | R | L | R | K | N | G | L | V |
Query Conservation |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|
|   |   |   |
|
|   |
|   |   |
|   |   |
|   |   |
|   |   |   |
|   |
|
|   |   |
|
|   |   |   |
|
|
|
Template Sequence |   |
M | V | N | S | Y | R | L | N | P | N | E | Y | F | S | V | T | T | A | R | R | N | V | S | G | D | A | A | A | L | F | R | L | H | K | F | L | T | K | W | G | L | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| T | T | S |
|
|
|  |  |  |  |  |  |  | S |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|