Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGK8
Confidence92.10%DateThu Jan 5 11:29:24 GMT 2012
Rank190Aligned Residues46
% Identity17%Templated2fbka1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50......
Predicted Secondary structure 













Query SS confidence 













































Query Sequence  VTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVS
Query Conservation 
  
  

        
   

    
    
 


  
  



 
Alig confidence 













































Template Conservation    

  
         
  


  
      

  
  
   
 
 
Template Sequence  WDLLLTLYRSAPPEGLRPTELSALAAISGPSTSNRIVRLLEKGLIE
Template Known Secondary structure 

SS
B

S

SGGGSSTS
Template Predicted Secondary structure 















Template SS confidence 













































   72.......80.........90.........100.........110.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions