Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGK8
Confidence96.09%DateThu Jan 5 11:29:24 GMT 2012
Rank92Aligned Residues51
% Identity31%Templated2etha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60....
Predicted Secondary structure 


















Query SS confidence 





















































Query Sequence  VTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGG
Query Conservation 
  
  

        
   

    
    
 


  
  



 
 

  

Alig confidence 









...








































Template Conservation    

  
   ...   
  


         

  
  
   


 
     
 
Template Sequence  LYAFLYVALF. . . GPKKXKEIAEFLSTTKSNVTNVVDSLEKRGLVVREXDPVDR
Template Known Secondary structure  ...

B
TTS
TTS
TTTS
Template Predicted Secondary structure 
...













Template SS confidence 





















































   35....40.... .....50.........60.........70.........80.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions