 |
Job Description | P0AGK8 | Confidence | 94.89% | Date | Thu Jan 5 11:29:24 GMT 2012 |
Rank | 136 | Aligned Residues | 63 |
% Identity | 17% | Template | d1zara1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Rio2 serine protein kinase N-terminal domain
|
Resolution | 1.75 |
|
 |
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | K | G | R | Y | A | V | T | A | M | L | D | V | A | L | N | S | E | A | G | P | V | P | L | A | D | I | S | E | R | Q | G | I | S | L | S | Y | L | E | Q | L | F | S | R | L | R | K | N | G | L | V | S | S | V | R | G | P | G | G | G | Y | L | L | G |
Query Conservation |   |
  |   |   |   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |
|   |   |
|
|
|
|   |
|   |
|
|   |   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|
|   |
|
|
|   |
|
|
|
|
| . |
|   |
|
|   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |
|   |
|
|
|
|
|
Template Sequence |   |
G | K | H | S | W | R | I | M | D | A | I | F | K | N | L | W | D | Y | . |
E | Y | V | P | L | Q | L | I | S | S | H | A | R | I | G | E | E | K | A | R | N | I | L | K | Y | L | S | D | L | R | V | V | Q | N | R | Q | K | D | Y | E | G | S | T | F | T |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T |
| . | S | S |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |
| S | S | S |
|  |  |  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|