Job Description P0AGK8 Confidence 66.19% Date Thu Jan 5 11:29:24 GMT 2012 Rank 310 Aligned Residues 56 % Identity 25% Template d1yyva1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain HxlR-like Resolution 2.35

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		R	Y	A	V	T	A	M	L	D	V	A	L	N	S	E	A	G	P	V	P	L	A	D	I	S	E	R	Q	G	I	S	L	S	Y	L	E	Q	L	F	S	R	L	R	K	N	G	L	V	S	S	V	R	G	P	G	G	G	.	.	.	.	Y	L	L	G
Query Conservation																																																											.	.	.	.
Alig confidence													.	.	.	.											.																																.	.	.	.
Template Conservation													.	.	.	.											.
Template Sequence		R	W	G	V	L	I	L	V	A	L	R	.	.	.	.	D	G	T	H	R	F	S	D	L	R	.	R	X	G	G	V	S	E	X	L	A	Q	S	L	Q	A	L	E	Q	D	G	F	L	N	R	V	S	Y	P	V	V	P	P	H	V	E	Y	S	L	T
Template Known Secondary structure											G	G	.	.	.	.	G										.			T	T																T									S	S	S
Template Predicted Secondary structure													.	.	.	.											.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions