Job Description P0AGK8 Confidence 99.97% Date Thu Jan 5 11:29:24 GMT 2012 Rank 4 Aligned Residues 116 % Identity 22% Template d1ylfa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator Rrf2 Resolution 2.50

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	T	S	K	G	R	Y	A	V	T	A	M	L	D	V	A	L	N	S	E	A	G	P	V	P	L	A	D	I	S	E	R	Q	G	I	S	L	S	Y	L	E	Q	L	F	S	R	L	R	K	N	G	L	V	S	S	V	R	G	P	G	G	G	Y	L	L	G	K	D	A	S	S	I	A	V	G	E	V	I	S
Query Conservation
Alig confidence																						.																																				.	.	.	.
Template Conservation																						.																																				.	.	.	.
Template Sequence		K	I	S	S	R	F	S	I	A	V	H	I	L	S	I	L	K	N	N	P	.	S	S	L	C	T	S	D	Y	X	A	E	S	V	N	T	N	P	V	V	I	R	K	I	X	S	Y	L	K	Q	A	G	F	V	Y	V	.	.	.	.	N	G	G	A	G	L	L	K	D	L	H	E	I	T	L	L	D	V	Y	H
Template Known Secondary structure																				S		.	G	G	G											T	S															T	T	S				.	.	.	.							S	S		G	G	G		B
Template Predicted Secondary structure																						.																																				.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	D	E	S	V	D	A	T	R	C	Q	G	K	G	G	C	Q	G	G	D	K	C	L	T	H	A	L	W	R	D	L	S	D	R	L	T	G	F	L	N	N	I	T	L	G	E	L	V	N	N	Q	E
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	N	V	.	.	.	.	.	.	.	.	.	.	.	.	I	G	A	N	I	Q	A	V	L	E	I	I	L	I	Q	A	Q	S	A	X	E	E	V	L	R	N	I	T	X	G	Q	L	F	E	T	L	Q
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.																										T		B
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.													.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions