Job Description P0AGK8 Confidence 99.96% Date Thu Jan 5 11:29:24 GMT 2012 Rank 5 Aligned Residues 116 % Identity 18% Template d1xd7a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator Rrf2 Resolution 2.30

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	G	R	Y	A	V	T	A	M	L	D	V	A	L	N	S	E	A	G	P	V	P	L	A	D	I	S	E	R	Q	G	I	S	L	S	Y	L	E	Q	L	F	S	R	L	R	K	N	G	L	V	S	S	V	R	G	P	G	G	G	Y	L	L	G	K	D	A	S	S	I	A	V	G	E	V	I	S	A	V	D
Query Conservation
Alig confidence																	.	.	.																																												.
Template Conservation																	.	.	.																																												.
Template Sequence		S	R	L	A	V	A	I	H	I	L	S	L	I	S	M	.	.	.	D	E	K	T	S	S	E	I	I	A	D	S	V	N	T	N	P	V	V	V	R	R	M	I	S	L	L	K	K	A	D	I	L	T	S	R	A	G	V	P	G	A	S	.	L	K	K	D	P	A	D	I	S	L	L	E	V	Y	R	A	V	Q
Template Known Secondary structure																T	.	.	.		S												T	S															T	T	S					S	S	S	S	S			.		S	S		G	G	G		B
Template Predicted Secondary structure																	.	.	.																																												.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	V	D	A	T	R	C	Q	G	K	G	G	C	Q	G	G	D	K	C	L	T	H	A	L	W	R	D	L	S	D	R	L	T	G	F	L	N	N	I	T	L	G	E	L	V	N
Query Conservation
Alig confidence				.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.
Template Sequence		K	N	.	.	.	.	.	.	.	P	K	C	P	V	G	K	K	I	Q	N	A	L	D	E	T	F	E	S	V	Q	R	A	M	E	N	E	L	A	S	K	S	L	K	D	V	M	N
Template Known Secondary structure				.	.	.	.	.	.	.			S																										T	T		B
Template Predicted Secondary structure				.	.	.	.	.	.	.
Template SS confidence
		82	.								.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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