Job Description P0AGK8 Confidence 27.66% Date Thu Jan 5 11:29:24 GMT 2012 Rank 441 Aligned Residues 53 % Identity 17% Template d1u5ta2 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Vacuolar sorting protein domain Resolution 3.60

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		L	D	V	A	L	N	S	E	A	G	P	V	P	L	A	D	I	S	E	R	Q	G	I	S	L	S	Y	L	E	Q	L	F	S	R	L	R	K	N	G	L	.	.	V	S	S	V	R	G	P	G	G	G	Y	L	L
Query Conservation																																										.	.
Alig confidence																																										.	.
Template Conservation
Template Sequence		K	I	L	E	I	C	S	I	L	G	Y	S	S	I	S	L	L	K	A	N	L	G	W	E	A	V	R	S	K	S	A	L	D	E	M	V	A	N	G	L	L	W	I	D	Y	Q	G	G	A	E	A	L	Y	W	D
Template Known Secondary structure						T	T	T	T	T	S			B												S													T	T	S	S					S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions