Job Description P0AGK8 Confidence 91.46% Date Thu Jan 5 11:29:24 GMT 2012 Rank 206 Aligned Residues 74 % Identity 18% Template d1r7ja_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Archaeal DNA-binding protein Resolution 1.47

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Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.
Query Sequence		S	K	G	R	Y	A	V	T	A	M	L	D	V	A	L	N	S	E	A	G	P	V	P	L	A	D	I	S	E	R	Q	G	I	S	L	S	Y	L	E	Q	L	F	S	R	L	R	K	N	G	L	V	S	S	V	R	G	P	G	G	G	Y	L	L	G	K	D	A	S	S	I	.	.	.	.	.	A	V	G	E	V
Query Conservation																																																																								.	.	.	.	.
Alig confidence																	.	.	.																																				.	.	.															.	.	.	.	.
Template Conservation																	.	.	.																																				.	.	.
Template Sequence		K	K	S	K	L	E	I	I	Q	A	I	L	E	A	C	.	.	.	K	S	G	S	P	K	T	R	I	M	Y	G	A	N	L	S	Y	A	L	T	G	R	Y	I	K	M	L	M	D	L	E	I	I	R	Q	.	.	.	E	G	K	Q	Y	M	L	T	K	K	G	E	E	L	L	E	D	I	R	K	F	N	E	M
Template Known Secondary structure																	.	.	.	T	T		B										T																T	T	S				.	.	.		T	T
Template Predicted Secondary structure																	.	.	.																																				.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.				.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	A	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	N	M	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions