Job Description P0AGK8 Confidence 50.52% Date Thu Jan 5 11:29:24 GMT 2012 Rank 354 Aligned Residues 61 % Identity 20% Template d1opca_ SCOP info DNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators PhoB-like Resolution 1.95

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.									.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																															.	.	.	.	.																	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.																	.	.	.	.	.	.	.	.
Query Sequence		G	R	Y	A	V	T	A	M	L	D	V	A	L	N	S	E	A	G	P	V	P	L	A	D	I	S	E	R	Q	.	.	.	.	.	G	I	S	L	S	Y	L	E	Q	L	F	S	R	L	R	K	.	.	.	.	.	.	.	.	N	G	L	V	S	S	V	R	G	P	G	G	G	Y	L	L	G	K	D
Query Conservation																															.	.	.	.	.																	.	.	.	.	.	.	.	.
Alig confidence																.															.	.	.	.	.																	.	.	.	.	.	.	.	.												.	.
Template Conservation																.																																																							.	.
Template Sequence		T	S	G	E	F	A	V	L	K	A	L	V	S	H	.	P	R	E	P	L	S	R	D	K	L	M	N	L	A	R	G	R	E	Y	S	A	M	E	R	S	I	D	V	Q	I	S	R	L	R	R	M	V	E	E	D	P	A	H	P	R	Y	I	Q	T	V	W	G	L	G	.	.	Y	V	F	V	P	D
Template Known Secondary structure															S	.	T	T															S	S	S		T	T	S	S															S		T	T	S		S	S					T	T	T		.	.
Template Predicted Secondary structure																.																																																							.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions