Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGK8
Confidence57.71%DateThu Jan 5 11:29:24 GMT 2012
Rank328Aligned Residues51
% Identity27%Templated1ixsb1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Helicase DNA-binding domain
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40......... 50.........60...
Predicted Secondary structure 










.






Query SS confidence 






































.













Query Sequence  VTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRL. RKNGLVSSVRGPGG
Query Conservation 
  
  

        
   

    
    
 


  
.  



 
 

  
Alig confidence 






































.





..





Template Conservation    

  

  
 





 


  
 
   


  





  
 
.. 

 

Template Sequence  REILEVLILRFGGGPVGLATLATALSEDPGTLEEVHEPYLIRQGLL. . KRTPRG
Template Known Secondary structure  TTTSSS
SS


SGGGSS
TTTSTTS..
SSS
Template Predicted Secondary structure 






..

Template SS confidence 





















































   250.........260.........270.........280.........290..... ....300.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions