Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGK8
Confidence96.42%DateThu Jan 5 11:29:24 GMT 2012
Rank72Aligned Residues55
% Identity15%Templated1hw1a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain GntR-like transcriptional regulators
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20...... ...30.........40.........50.........60......
Predicted Secondary structure 






.











Query SS confidence 















.







































Query Sequence  VTAMLDVALNSEAGPV. PLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYL
Query Conservation 
  
  

        .
   

    
    
 


  
  



 
 

  


 
Alig confidence 















.


































.



Template Conservation 
   
  
    
  


   

    

  


 

  
   
 
    
 .
  
Template Sequence  IIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGK. PTKV
Template Known Secondary structure  TTSS
TTSB


T

TTSTT.
Template Predicted Secondary structure 




















.
Template SS confidence 
























































   16...20.........30.........40.........50.........60....... ..70.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions