Job Description P0AGK8 Confidence 93.70% Date Thu Jan 5 11:29:24 GMT 2012 Rank 160 Aligned Residues 68 % Identity 13% Template c3p9kD_ PDB info PDB header:transferase Chain: D: PDB Molecule:caffeic acid o-methyltransferase; PDBTitle: crystal structure of perennial ryegrass lpomt1 complexed with s-2 adenosyl-l-homocysteine and coniferaldehyde Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.						20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																				.	.	.	.	.																											.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.																				.	.	.	.	.																											.	.	.	.	.	.
Query Sequence		M	R	L	T	S	K	G	R	Y	A	V	T	A	M	L	D	V	A	L	.	.	.	.	.	N	S	E	A	G	P	V	P	L	A	D	I	S	E	R	Q	G	I	S	.	.	.	.	.	L	S	Y	L	E	Q	L	F	S	R	L	R	K	N	G	L	V	S	S	V	R	G	P	G	G	G	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.																				.	.	.	.	.																											.	.	.	.	.	.
Alig confidence																					.	.	.	.	.																				.	.	.	.	.																											.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	S	S	S	V	L	P	M	T	L	K	N	A	I	E	L	G	L	L	E	I	L	V	A	A	G	G	K	S	L	T	P	T	E	V	A	A	K	L	P	S	A	A	N	P	E	A	P	D	M	V	D	R	I	L	R	L	L	A	S	Y	N	V	V	T	C	L	V	E	E	G	K	D	G	R	L	S	R	S
Template Known Secondary structure			T	T	T	T													T								T	T	T			B								T		T	T				T	T															T	T	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		65	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions