Job Description P0AGK8 Confidence 100.00% Date Thu Jan 5 11:29:24 GMT 2012 Rank 3 Aligned Residues 136 % Identity 14% Template c3k69A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcription regulator; PDBTitle: crystal structure of a putative transcriptional regulator (lp_0360)2 from lactobacillus plantarum at 1.95 a resolution Resolution 1.95 Å

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		6	.	.	.			10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		K	G	R	Y	.	.	A	V	T	A	M	L	D	V	A	L	N	S	E	A	G	P	V	P	L	A	D	I	S	E	R	Q	G	I	S	L	S	Y	L	E	Q	L	F	S	R	L	R	K	N	G	L	V	S	S	V	R	G	P	G	G	G	Y	L	L	G	K	D	A	S	S	I	A	V	G	E	V	I	S	A	V
Query Conservation						.	.
Alig confidence						.	.												.
Template Conservation																			.
Template Sequence		K	L	D	F	S	V	A	V	H	S	I	L	Y	L	D	A	H	.	R	D	S	K	V	A	S	R	E	L	A	Q	S	L	H	L	N	P	V	X	I	R	N	I	L	S	V	L	H	K	H	G	Y	L	T	G	T	V	G	K	N	G	G	Y	Q	L	D	L	A	L	A	D	X	N	L	G	D	L	Y	D	L	T
Template Known Secondary structure		T															T	T	.	T	T	S		B										T	S		G	G	G	T										T	T	S	S					S	T	T							S		G	G	G	S	B
Template Predicted Secondary structure																			.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.								.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.
Query Sequence		D	E	S	V	D	A	T	R	C	Q	G	K	G	G	C	Q	G	G	D	.	.	.	.	.	.	.	K	C	L	T	H	A	L	W	R	D	L	S	D	R	L	T	G	F	L	N	N	I	T	L	G	E	L	V	N	N	Q	E	V	L	D	V	S	G	R	Q
Query Conservation																					.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	P	P	T	I	S	Y	A	R	F	I	T	G	P	S	K	A	D	Q	S	P	I	A	A	N	I	S	E	T	L	T	D	L	F	T	V	A	D	R	Q	Y	R	A	Y	Y	H	Q	F	T	X	A	D	L	Q	A	D	L	N	H	H	G	T	F	L	Q	H
Template Known Secondary structure		S				S			G	G	G			S																																		T		B										S	T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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