Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGK8
Confidence79.86%DateThu Jan 5 11:29:24 GMT 2012
Rank256Aligned Residues60
% Identity15%Templatec3elkA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:putative transcriptional regulator ta0346; PDBTitle: crystal structure of putative transcriptional regulator ta0346 from2 thermoplasma acidophilum
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30... ......40.........50.........60....
Predicted Secondary structure 







..










Query SS confidence 




























. .






























Query Sequence  SKGRYAVTAMLDVALNSEAGPVPLADISE. . RQGISLSYLEQLFSRLRKNGLVSSVRGPGGG
Query Conservation      


  
  

        
   

 ..   
    
 


  
  



 
 

  

Alig confidence 




























..






























Template Conservation   

 
   

  
   
  



   
       
  



  
  

  


        
Template Sequence  LHGLITLYILKELVKRPXHGYELQKSXFETTGQALPQGSIYILLKTXKERGFVISESSVNKG
Template Known Secondary structure  S
S



TTTS


Template Predicted Secondary structure 



















Template SS confidence 





























































   11........20.........30.........40.........50.........60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions