Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGK8
Confidence62.89%DateThu Jan 5 11:29:24 GMT 2012
Rank315Aligned Residues46
% Identity9%Templatec3dplC_
PDB info PDB header:ligaseChain: C: PDB Molecule:cullin-5; PDBTitle: structural insights into nedd8 activation of cullin-ring2 ligases: conformational control of conjugation.
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.... .....30.........40.........50.....
Predicted Secondary structure 




.








Query SS confidence 














.






























Query Sequence  AVTAMLDVALNSEAG. PVPLADISERQGISLSYLEQLFSRLRKNGLV
Query Conservation 

  
  

      .  
   

    
    
 


  
  



Alig confidence 














.






























Template Conservation    

 


 

      

  

     
    
   
  
      
Template Sequence  TFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKL
Template Known Secondary structure  GGGTT
TT






TT
Template Predicted Secondary structure 
















Template SS confidence 














































   597..600.........610.........620.........630.........640...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions