Job Description P0AGK8 Confidence 97.07% Date Thu Jan 5 11:29:24 GMT 2012 Rank 37 Aligned Residues 72 % Identity 10% Template c3by6C_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:predicted transcriptional regulator; PDBTitle: crystal structure of a transcriptional regulator from oenococcus oeni Resolution 2.20 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		V	T	A	M	L	D	V	A	L	N	S	E	A	G	P	V	.	P	L	A	D	I	S	E	R	Q	G	I	S	L	S	Y	L	E	Q	L	F	S	R	L	R	K	N	G	L	V	S	S	V	R	G	P	G	G	G	Y	L	L	G	K	D	A	S	S	I	A	V	G	E	V	I	S	A	V	D
Query Conservation																		.
Alig confidence																		.																																	.	.
Template Conservation																																																			.	.
Template Sequence		I	K	N	E	V	A	T	D	V	L	S	A	N	D	Q	L	P	S	V	R	E	T	A	L	Q	E	K	I	N	P	N	T	V	A	K	A	Y	K	E	L	E	A	Q	K	V	I	R	T	I	.	.	P	G	K	G	T	F	I	T	G	N	T	A	S	V	K	N	S	N	Q	N	R	L	L	A
Template Known Secondary structure								T	T	S	S		T	T		B												T																T	T	S					.	.	T	T	T						S
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions