Job Description P0AGK8 Confidence 78.03% Date Thu Jan 5 11:29:24 GMT 2012 Rank 265 Aligned Residues 60 % Identity 18% Template c2zxjB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulatory protein walr; PDBTitle: crystal structure of yycf dna-binding domain from staphylococcus2 aureus Resolution 1.87 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.									.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.																	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.																	.	.	.	.	.	.	.	.
Query Sequence		G	R	Y	A	V	T	A	M	L	D	V	A	L	N	S	E	A	G	P	V	P	L	A	D	I	S	E	R	Q	.	.	.	.	.	G	I	S	L	S	Y	L	E	Q	L	F	S	R	L	R	K	.	.	.	.	.	.	.	.	N	G	L	V	S	S	V	R	G	P	G	G	G	Y	L	L	G	K
Query Conservation																															.	.	.	.	.																	.	.	.	.	.	.	.	.
Alig confidence																.															.	.	.	.	.																	.	.	.	.	.	.	.	.												.	.
Template Conservation																.																																																							.	.
Template Sequence		T	H	R	E	F	E	L	F	H	Y	L	S	K	H	.	M	G	Q	V	M	T	R	E	H	L	L	Q	T	V	W	G	Y	D	Y	F	G	D	V	R	T	V	D	V	T	I	R	R	L	R	E	K	I	E	D	D	P	S	H	P	E	Y	I	V	T	R	R	G	V	G	.	.	Y	F	L	Q	Q
Template Known Secondary structure														T	T	.	T	T													T		T	T			S		T																S	S	T	T	S		S	S					T	T	T		.	.
Template Predicted Secondary structure																.																																																							.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions