Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGK8
Confidence62.88%DateThu Jan 5 11:29:24 GMT 2012
Rank316Aligned Residues55
% Identity24%Templatec2xv4S_
PDB info PDB header:transcriptionChain: S: PDB Molecule:dna-directed rna polymerase iii subunit rpc3; PDBTitle: structure of human rpc62 (partial)
Resolution2.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60...
Predicted Secondary structure 

















Query SS confidence 

























































Query Sequence  KGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGG
Query Conservation     


  
  

        
   

    
    
 


  
  



 
 

  
Alig confidence 













...








































Template Conservation 

     
   

 ... 
  

  
   
 
    

  
 




  
 
      
Template Sequence  FGEIVEKIGVHLIR. . . TGSQPLRVIAHDTGTSLDQVKKALCVLVQHNLVSYQVHKRG
Template Known Secondary structure 
...S
ST

TTSTTT
Template Predicted Secondary structure 


...














Template SS confidence 

























































   17..20.........30 .........40.........50.........60.........70.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions