Job Description P0AGK8 Confidence 95.50% Date Thu Jan 5 11:29:24 GMT 2012 Rank 112 Aligned Residues 57 % Identity 11% Template c2qufB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription factor pf0095; PDBTitle: crystal structure of transcription factor axxa-pf0095 from pyrococcus2 furiosus Resolution 2.80 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		V	T	A	M	L	D	V	A	L	N	S	E	A	G	P	V	P	L	A	D	I	S	E	R	Q	G	I	S	L	S	Y	L	E	Q	L	F	S	R	L	R	K	N	G	L	V	S	S	V	R	G	P	G	G	G	.	.	Y	L	L	G	K	D	A
Query Conservation																																																								.	.
Alig confidence										.	.	.	.																																											.	.
Template Conservation										.	.	.	.
Template Sequence		R	D	L	L	S	H	L	T	.	.	.	.	A	M	E	A	Y	F	S	L	L	S	S	K	V	S	V	S	S	T	A	V	A	K	H	L	K	I	M	E	R	E	G	V	L	Q	S	Y	Y	K	I	S	I	A	K	S	Y	V	F	T	L	T	P
Template Known Secondary structure									T	.	.	.	.		T	T	T		S	S	S	S		S	S	S																T	T	T	S																			T
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions