Job Description P0AGK8 Confidence 43.60% Date Thu Jan 5 11:29:24 GMT 2012 Rank 371 Aligned Residues 42 % Identity 10% Template c2q0oA_ PDB info PDB header:transcription Chain: A: PDB Molecule:probable transcriptional activator protein trar; PDBTitle: crystal structure of an anti-activation complex in bacterial quorum2 sensing Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	T	S	K	G	R	Y	A	V	T	A	M	L	D	V	A	L	N	S	E	A	G	P	V	P	L	A	D	I	S	E	R	Q	G	I	S	L	S	Y	L	E	Q	L	F	S	R	L	R	K
Query Conservation
Alig confidence								.	.	.										.	.	.			.	.
Template Conservation								.	.	.										.	.	.			.	.
Template Sequence		M	L	S	P	R	E	.	.	.	M	L	C	L	V	W	A	S	K	.	.	.	G	K	.	.	T	A	S	V	T	A	N	L	T	G	I	N	A	R	T	V	Q	H	Y	L	D	K	A	R	A
Template Known Secondary structure		S						.	.	.									T	.	.	.	T		.	.
Template Predicted Secondary structure								.	.	.										.	.	.			.	.
Template SS confidence
		175	.	.	.	.	180				.	.	.	.	.	.	.	.	.				190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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