Job Description P0AGK8 Confidence 37.34% Date Thu Jan 5 11:29:24 GMT 2012 Rank 400 Aligned Residues 61 % Identity 20% Template c2hwvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:dna-binding response regulator vicr; PDBTitle: crystal structure of an essential response regulator dna binding2 domain, vicrc in enterococcus faecalis, a member of the yycf3 subfamily. Resolution 1.90 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.									.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																															.	.	.	.	.																	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.																	.	.	.	.	.	.	.	.
Query Sequence		G	R	Y	A	V	T	A	M	L	D	V	A	L	N	S	E	A	G	P	V	P	L	A	D	I	S	E	R	Q	.	.	.	.	.	G	I	S	L	S	Y	L	E	Q	L	F	S	R	L	R	K	.	.	.	.	.	.	.	.	N	G	L	V	S	S	V	R	G	P	G	G	G	Y	L	L	G	K	D
Query Conservation																															.	.	.	.	.																	.	.	.	.	.	.	.	.
Alig confidence																.															.	.	.	.	.																	.	.	.	.	.	.	.	.												.	.
Template Conservation																.																																																							.	.
Template Sequence		T	H	R	E	F	E	L	L	Y	Y	L	A	K	H	.	I	G	Q	V	M	T	R	E	H	L	L	Q	T	V	W	G	Y	D	Y	F	G	D	V	R	T	V	D	V	T	V	R	R	L	R	E	K	I	E	D	S	P	S	H	P	T	Y	L	V	T	R	R	G	V	G	.	.	Y	Y	L	R	N	P
Template Known Secondary structure															T	.	T	T			B										T		G	G	G	T	T																		S	S	T	T	S		S	S					T	T	T		.	.
Template Predicted Secondary structure																.																																																							.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions