Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGK8
Confidence97.86%DateThu Jan 5 11:29:24 GMT 2012
Rank7Aligned Residues71
% Identity21%Templatec2ewnA_
PDB info PDB header:ligase, transcriptionChain: A: PDB Molecule:bira bifunctional protein; PDBTitle: ecoli biotin repressor with co-repressor analog
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.... .....60.........70.........80......
Predicted Secondary structure 













.













Query SS confidence 











































.































Query Sequence  VTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGL. VSSVRGPGGGYLLGKDASSIAVGEVISAVDES
Query Conservation 
  
  

        
   

    
    
 


  
  


.
 
 

  


 


    


 


 



 
Alig confidence 







...
































.



..

























Template Conservation    

  
 ... 
   

  

  




 



 
  
   
  
   ..   

 
      
    
   
   
Template Sequence  LKLIALLA. . . NGEFHSGEQLGETLGMSRAAINKHIQTLRDWGVDVFTV. . PGKGYSLPEPIQLLNAKQILGQLDGG
Template Known Secondary structure  T...T


B
TTTS
TT


..TTT
SS





TTSSSS
Template Predicted Secondary structure  ...











..
















Template SS confidence 












































































   8.10..... ....20.........30.........40.........50... ......60.........70.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions