Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGK8
Confidence77.58%DateThu Jan 5 11:29:24 GMT 2012
Rank270Aligned Residues55
% Identity25%Templatec1xmaA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:predicted transcriptional regulator; PDBTitle: structure of a transcriptional regulator from clostridium thermocellum2 cth-833
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30..... ....40.........50.........60....
Predicted Secondary structure 







........










Query SS confidence 





























. . . . . . . .




























Query Sequence  KGRYAVTAMLDVALNSEAGPVPLADISERQ. . . . . . . . GISLSYLEQLFSRLRKNGLVSSVRGPGGG
Query Conservation     


  
  

        
   

   ........ 
    
 


  
  



 
 

  

Alig confidence 












....












........




























Template Conservation 

 
   

  
 ....     



   
         

 
 

  
  

  
 
         
Template Sequence  RGYVDTIILSLLI. . . . EGDSYGYEISKNIRIKTDELYVIKETTLYSAFARLEKNGYIKSYYGEETK
Template Known Secondary structure  GGT....

TTS



TTS

Template Predicted Secondary structure 
....





















Template SS confidence 


































































   8.10.........20 .........30.........40.........50.........60.........70
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions