Job Description P0AGK8 Confidence 91.25% Date Thu Jan 5 11:29:24 GMT 2012 Rank 208 Aligned Residues 54 % Identity 26% Template c1kgsA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna binding response regulator d; PDBTitle: crystal structure at 1.50 a of an ompr/phob homolog from thermotoga2 maritima Resolution 1.50 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.														.	.	.
Query SS confidence																													.	.	.	.														.	.	.
Query Sequence		T	A	M	L	D	V	A	L	N	S	E	A	G	P	V	P	L	A	D	I	S	E	R	Q	G	I	S	.	.	.	.	L	S	Y	L	E	Q	L	F	S	R	L	R	K	.	.	.	N	G	L	V	S	S	V	R	G	P	G	G	G	Y	L	L
Query Conservation																													.	.	.	.														.	.	.
Alig confidence																													.	.	.	.														.	.	.										.	.
Template Conservation																																																										.	.
Template Sequence		Y	Q	I	L	E	Y	L	V	X	N	K	N	R	V	V	T	K	E	E	L	Q	E	H	L	W	V	F	S	D	V	L	R	S	H	I	K	N	L	R	K	K	V	D	K	G	F	K	K	K	I	I	H	T	V	R	G	.	.	I	G	Y	V	A
Template Known Secondary structure											T	T	T	S																															T	T		S	S							T	T	.	.	T
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions