Job Description P0A6D5 Confidence 100.00% Date Thu Jan 5 11:02:53 GMT 2012 Rank 17 Aligned Residues 247 % Identity 29% Template c3u62A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima Resolution 1.45 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	L	M	A	Y	P	I	R	H	S	L	S	P	E	M	Q	N	K	A	L	E	K	A	G	L	P	F	T	Y	M	A	F	E	V	D	N	D	S	F	P	G	A	I	E	G	L	K	A	L	K	M	R	G	T	G	V	S	M	P	N	K	Q	L	A	C	E	Y	V	D	E	L	T	P	A	A	K	L	V	G
Query Conservation
Alig confidence																																																			.																						.
Template Conservation																																																			.																						.
Template Sequence		F	C	I	I	G	Y	P	V	R	H	S	I	S	P	R	L	Y	N	E	Y	F	K	R	A	G	M	N	H	S	Y	G	M	E	E	I	P	P	E	S	F	D	T	E	I	R	R	I	L	E	.	E	Y	D	G	F	N	A	T	I	P	H	K	E	R	V	M	R	Y	V	E	P	.	S	E	D	A	Q	R	I	K
Template Known Secondary structure							S	S		T	T		S													T												G	G	G											.			S						T	T		T	T	G	G	G	G	G	S			.								T
Template Predicted Secondary structure																																																			.																						.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	N	T	I	V	N	D	D	G	Y	L	R	G	Y	N	T	D	G	T	G	H	I	R	A	I	K	E	S	G	F	D	I	K	G	K	T	M	V	L	L	G	A	G	G	A	S	T	A	I	G	A	Q	G	A	I	E	G	L	K	E	I	K	L	F	N	R	R	D	E	F	F	D	K	A	L	A	F	A	Q
Query Conservation
Alig confidence											.	.	.	.																			.	.	.																																								.	.	.	.	.	.	.
Template Conservation											.	.	.	.																			.	.	.																																								.	.	.	.	.	.	.
Template Sequence		A	V	N	C	V	F	R	G	K	.	.	.	.	G	Y	N	T	D	W	V	G	V	V	K	S	L	E	G	V	E	V	.	.	.	K	E	P	V	V	V	V	G	A	G	G	A	A	R	A	V	I	Y	A	L	L	Q	M	G	V	K	D	I	W	V	V	N	R	T	I	E	R	A	K	.	.	.	.	.	.	.
Template Known Secondary structure								T	T		.	.	.	.													T	T	T				.	.	.		S	S							S													T	T									S							.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.																			.	.	.																																								.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	N	E	N	T	D	C	V	V	T	V	T	D	L	A	D	Q	Q	A	F	A	E	A	L	A	S	A	D	I	L	T	N	G	T	K	V	G	M	K	P	L	E	N	E	S	L	V	N	D	I	S	L	L	H	P	G	L	L	V	T	E	C	V	Y	N	P	H	M	T	K	L	L	Q	Q	A	Q	Q	A	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																			.	.	.																								.	.
Template Conservation		.	.	.	.	.	.	.																																			.	.	.																								.	.
Template Sequence		.	.	.	.	.	.	.	A	L	D	F	P	V	K	I	F	S	L	D	Q	L	D	E	V	V	K	K	A	K	S	L	F	N	T	T	S	V	G	M	K	G	.	.	.	E	E	L	P	V	S	D	D	S	L	K	N	L	S	L	V	Y	D	V	I	Y	F	D	.	.	T	P	L	V	V	K	A	R	K	L	G
Template Known Secondary structure		.	.	.	.	.	.	.	T			S	S						G	G	G							T		S						S	S	T	T	T	T	S	.	.	.				S							T	T		S						S	S	S		.	.											T
Template Predicted Secondary structure		.	.	.	.	.	.	.																																			.	.	.																								.	.
Template SS confidence
									147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.
		250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.
Predicted Secondary structure				.																											.	.
Query SS confidence				.																											.	.
Query Sequence		C	K	.	T	I	D	G	Y	G	M	L	L	W	Q	G	A	E	Q	F	T	L	W	T	G	K	D	F	P	L	.	.	E	Y	V	K	Q	V	M
Query Conservation				.																											.	.
Alig confidence				.																											.	.
Template Conservation
Template Sequence		V	K	H	I	I	K	G	N	L	M	F	Y	Y	Q	A	M	E	N	L	K	I	W	G	I	Y	D	E	E	V	F	K	E	V	F	G	E	V	L
Template Known Secondary structure			S					T															T	T												G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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