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Job DescriptionP0A6D5
Confidence100.00%DateThu Jan 5 11:02:53 GMT 2012
Rank8Aligned Residues264
% Identity28%Templatec3pwzA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:shikimate dehydrogenase 3; PDBTitle: crystal structure of an ael1 enzyme from pseudomonas putida
Resolution1.71 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  YELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAAK
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Template Sequence  SDRYAVIGRPINHTKSPLIHGLFAQASNQQLEYGAIEGSLDDFEAQVLQFRSEGGKGMNITAPFKLRAFELADRRSERAQ
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SS
TT
STT



TTTTT


TT

S
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   87..90.........100.........110........ .120.........130.........140.........150.........160.....
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Query Sequence  LVGAINTIVNDDGYLRGYNTDGTGHIRAIKES. GFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKAL
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Template Sequence  LARAANALKFEDGRIVAENFDGIGLLRDIEENLGEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD. . . MAKAL
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STT

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   82.......90.........100.........110.........120.........130.........140.........150... .....
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  AFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKLLQQA
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Template Sequence  ALRNELDHSRLRISRYEALEGQS. . . . . . . . FDIVVNATSASLTADL. . . PPLPADVLGEAALAYELAYGKGLTPFLRLA
Template Known Secondary structure 

TT
SGGGTT

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S
SSGGGGT

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GGGGTT
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   159160.........170.........180. ........190....... ..200.........210.........220.......
 
   246... 250.........260.........270.........280....
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Query Sequence  QQAG. CKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVM
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Template Sequence  REQGQARLADGVGMLVEQAAEAFAWWRGVRPDTRAVINQL
Template Known Secondary structure  S


TS




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   228.230.........240.........250.........260.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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