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Job DescriptionP0A6D5
Confidence100.00%DateThu Jan 5 11:02:53 GMT 2012
Rank11Aligned Residues259
% Identity30%Templatec3o8qB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:shikimate 5-dehydrogenase i alpha; PDBTitle: 1.45 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  ELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAAKL
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Template Sequence  DQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVPFKEEAYRFADRLTERARL
Template Known Secondary structure  SS
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   88.90...... ...100.........110.........120.........130.........140.........150.........160......
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Query Sequence  VGAINTIVN. DDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALA
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Template Sequence  AGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAE
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
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Query Sequence  FAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKLLQQAQ
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Template Sequence  LVAAYG. . . . . . . . . . . EVKAQAFEQLKQSYDVIINSTSGELP. . . . . . . AIDPVIFSSRSVCYDMMYGKGYTVFNQWAR
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   166...170. ........180.........190....... ..200.........210.........220.......
 
   247..250 .........260.........270.........280....
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Query Sequence  QAGC. KTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVM
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Template Sequence  QHGCAQAIDGLGMLVGQAAESFMLWRGLRPGTKQILREL
Template Known Secondary structure  TT
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   232.......240.........250.........260.........270
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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